Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Gm37025-201ENSMUST00000195159 829 ntBASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cracr2aQ3UP38 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cracr2aQ3UP38 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cracr2aQ3UP38 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.64■□□□□ 0.57
Cracr2aQ3UP38 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cracr2aQ3UP38 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gm11539-201ENSMUST00000119837 557 ntBASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gm13436-201ENSMUST00000120418 567 ntBASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gm13559-201ENSMUST00000120476 863 ntBASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gm13836-201ENSMUST00000121159 501 ntBASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cracr2aQ3UP38 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cracr2aQ3UP38 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cracr2aQ3UP38 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cracr2aQ3UP38 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms