Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1brtQ3UNC9 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.4□□□□□ -0.43
Cks1brtQ3UNC9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cks1brtQ3UNC9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gm13238-201ENSMUST00000117655 780 ntBASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Sybu-209ENSMUST00000228639 4113 ntBASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1brtQ3UNC9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Cks1brtQ3UNC9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Gm11175-201ENSMUST00000116172 543 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms