Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf44Q3UHJ8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.53■□□□□ 0.24
Rnf44Q3UHJ8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Gm13559-201ENSMUST00000120476 863 ntBASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf44Q3UHJ8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf44Q3UHJ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf44Q3UHJ8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf44Q3UHJ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf44Q3UHJ8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Gm43799-201ENSMUST00000201845 579 ntBASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf44Q3UHJ8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf44Q3UHJ8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf44Q3UHJ8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms