Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Spg11Q3UHA3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Mir6977-201ENSMUST00000184960 64 ntBASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.78■□□□□ 0.12
Spg11Q3UHA3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spg11Q3UHA3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spg11Q3UHA3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Phf7-203ENSMUST00000226565 1971 ntBASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spg11Q3UHA3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.75■□□□□ 0.11
Spg11Q3UHA3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Spg11Q3UHA3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Spg11Q3UHA3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms