Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shcbp1lQ3TTP0 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Gm6659-201ENSMUST00000174752 547 ntBASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Gm18101-201ENSMUST00000215769 548 ntBASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.24■□□□□ 0.35
Shcbp1lQ3TTP0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shcbp1lQ3TTP0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shcbp1lQ3TTP0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shcbp1lQ3TTP0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Shcbp1lQ3TTP0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shcbp1lQ3TTP0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.21■□□□□ 0.34
Shcbp1lQ3TTP0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shcbp1lQ3TTP0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shcbp1lQ3TTP0 Gm22697-201ENSMUST00000175194 63 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms