Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cul4aQ3TCH7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cul4aQ3TCH7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cul4aQ3TCH7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cul4aQ3TCH7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cul4aQ3TCH7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cul4aQ3TCH7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cul4aQ3TCH7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cul4aQ3TCH7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cul4aQ3TCH7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms