Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.85■□□□□ 0.29
Q3KNL4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Q3KNL4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Q3KNL4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Q3KNL4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Q3KNL4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.84■□□□□ 0.29
Q3KNL4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Q3KNL4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.84■□□□□ 0.29
Q3KNL4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Q3KNL4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.84■□□□□ 0.29
Q3KNL4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.84■□□□□ 0.29
Q3KNL4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Q3KNL4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Q3KNL4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Q3KNL4 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.83■□□□□ 0.28
Q3KNL4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q3KNL4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Q3KNL4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.82■□□□□ 0.28
Q3KNL4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.82■□□□□ 0.28
Q3KNL4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.82■□□□□ 0.28
Q3KNL4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.82■□□□□ 0.28
Q3KNL4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Q3KNL4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Q3KNL4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q3KNL4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.81■□□□□ 0.28
Q3KNL4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.81■□□□□ 0.28
Q3KNL4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Q3KNL4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Gm6576-201ENSMUST00000169678 883 ntBASIC16.81■□□□□ 0.28
Q3KNL4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.81■□□□□ 0.28
Q3KNL4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.81■□□□□ 0.28
Q3KNL4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Q3KNL4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q3KNL4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Q3KNL4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Q3KNL4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
Q3KNL4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Q3KNL4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.8■□□□□ 0.28
Q3KNL4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Q3KNL4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q3KNL4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms