Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim63Q38HM4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Gm43530-201ENSMUST00000195920 274 ntBASIC14.21□□□□□ -0.13
Trim63Q38HM4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim63Q38HM4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim63Q38HM4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.2□□□□□ -0.14
Trim63Q38HM4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim63Q38HM4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.19□□□□□ -0.14
Trim63Q38HM4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim63Q38HM4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Tgds-204ENSMUST00000228543 1594 ntBASIC14.18□□□□□ -0.14
Trim63Q38HM4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim63Q38HM4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.18□□□□□ -0.14
Trim63Q38HM4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim63Q38HM4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms