Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm43474-201ENSMUST00000196415 774 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm27494-201ENSMUST00000184735 189 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm43433-201ENSMUST00000196573 481 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm44335-201ENSMUST00000196879 141 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm44297-201ENSMUST00000198304 141 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Gm44346-201ENSMUST00000198851 141 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.15□□□□□ -0.94
Ush2AQ2QI47 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ush2AQ2QI47 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm13223-201ENSMUST00000118609 747 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm32051-202ENSMUST00000197905 2385 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Mir1938-201ENSMUST00000158746 100 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm44719-201ENSMUST00000206404 149 ntBASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ush2AQ2QI47 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm12151-201ENSMUST00000121374 290 ntBASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ush2AQ2QI47 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.12□□□□□ -0.95
Ush2AQ2QI47 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms