Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ptchd3Q0EEE2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ptchd3Q0EEE2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Gm44549-201ENSMUST00000208351 577 ntBASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Ptchd3Q0EEE2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ptchd3Q0EEE2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ptchd3Q0EEE2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Gm2399-201ENSMUST00000104944 225 ntBASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ptchd3Q0EEE2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms