Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox4Q06831 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.82■□□□□ 0.28
Sox4Q06831 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox4Q06831 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Sox4Q06831 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox4Q06831 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox4Q06831 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox4Q06831 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox4Q06831 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.82■□□□□ 0.28
Sox4Q06831 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.82■□□□□ 0.28
Sox4Q06831 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Sox4Q06831 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox4Q06831 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Sox4Q06831 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox4Q06831 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.81■□□□□ 0.28
Sox4Q06831 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Gm10231-201ENSMUST00000181584 441 ntBASIC16.81■□□□□ 0.28
Sox4Q06831 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Gm10175-202ENSMUST00000208752 441 ntBASIC16.81■□□□□ 0.28
Sox4Q06831 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.81■□□□□ 0.28
Sox4Q06831 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox4Q06831 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sox4Q06831 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.81■□□□□ 0.28
Sox4Q06831 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox4Q06831 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox4Q06831 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox4Q06831 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox4Q06831 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Gm7370-201ENSMUST00000219471 767 ntBASIC16.8■□□□□ 0.28
Sox4Q06831 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox4Q06831 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox4Q06831 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sox4Q06831 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox4Q06831 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Mir5130-201ENSMUST00000175160 84 ntBASIC16.79■□□□□ 0.28
Sox4Q06831 Gm45058-201ENSMUST00000205810 766 ntBASIC16.79■□□□□ 0.28
Sox4Q06831 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.79■□□□□ 0.28
Sox4Q06831 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sox4Q06831 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox4Q06831 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox4Q06831 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.78■□□□□ 0.28
Sox4Q06831 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox4Q06831 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Gm18958-201ENSMUST00000174258 762 ntBASIC16.78■□□□□ 0.28
Sox4Q06831 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.78■□□□□ 0.28
Sox4Q06831 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.78■□□□□ 0.28
Sox4Q06831 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sox4Q06831 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sox4Q06831 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox4Q06831 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms