Protein–RNA interactions for Protein: Q03347

Runx1, Runt-related transcription factor 1, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1Q03347 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Runx1Q03347 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.12□□□□□ -0.31
Runx1Q03347 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Runx1Q03347 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.12□□□□□ -0.31
Runx1Q03347 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Runx1Q03347 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Runx1Q03347 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.11□□□□□ -0.31
Runx1Q03347 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Runx1Q03347 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.11□□□□□ -0.31
Runx1Q03347 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Mir6982-201ENSMUST00000184354 68 ntBASIC13.11□□□□□ -0.31
Runx1Q03347 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Runx1Q03347 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.11□□□□□ -0.31
Runx1Q03347 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Runx1Q03347 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Runx1Q03347 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Runx1Q03347 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Runx1Q03347 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Runx1Q03347 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.1□□□□□ -0.31
Runx1Q03347 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Gm27463-201ENSMUST00000183569 57 ntBASIC13.1□□□□□ -0.31
Runx1Q03347 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Runx1Q03347 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Runx1Q03347 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Runx1Q03347 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Runx1Q03347 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Runx1Q03347 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.09□□□□□ -0.31
Runx1Q03347 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.09□□□□□ -0.31
Runx1Q03347 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Gm30025-201ENSMUST00000218555 728 ntBASIC13.09□□□□□ -0.31
Runx1Q03347 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.09□□□□□ -0.31
Runx1Q03347 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
Runx1Q03347 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Runx1Q03347 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Runx1Q03347 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Runx1Q03347 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Runx1Q03347 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Runx1Q03347 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.08□□□□□ -0.32
Runx1Q03347 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Runx1Q03347 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms