Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Nkx2-3P97334 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-3P97334 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-3P97334 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-3P97334 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-3P97334 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-3P97334 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Gm44771-201ENSMUST00000206975 626 ntBASIC21.57■■□□□ 1.04
Nkx2-3P97334 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-3P97334 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.57■■□□□ 1.04
Nkx2-3P97334 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Gm27459-201ENSMUST00000184860 107 ntBASIC21.56■■□□□ 1.04
Nkx2-3P97334 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkx2-3P97334 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.55■■□□□ 1.04
Nkx2-3P97334 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.54■■□□□ 1.04
Nkx2-3P97334 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.54■■□□□ 1.04
Nkx2-3P97334 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nkx2-3P97334 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.53■■□□□ 1.04
Nkx2-3P97334 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.53■■□□□ 1.04
Nkx2-3P97334 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.53■■□□□ 1.04
Nkx2-3P97334 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkx2-3P97334 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.52■■□□□ 1.04
Nkx2-3P97334 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Nkx2-3P97334 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Nkx2-3P97334 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Nkx2-3P97334 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms