Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.34■□□□□ 0.37
Cdh6P97326 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdh6P97326 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdh6P97326 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh6P97326 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh6P97326 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdh6P97326 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.33■□□□□ 0.37
Cdh6P97326 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Cdh6P97326 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh6P97326 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdh6P97326 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdh6P97326 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.32■□□□□ 0.36
Cdh6P97326 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdh6P97326 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.32■□□□□ 0.36
Cdh6P97326 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.32■□□□□ 0.36
Cdh6P97326 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.32■□□□□ 0.36
Cdh6P97326 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cdh6P97326 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.32■□□□□ 0.36
Cdh6P97326 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cdh6P97326 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdh6P97326 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdh6P97326 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.31■□□□□ 0.36
Cdh6P97326 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Cdh6P97326 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdh6P97326 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdh6P97326 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdh6P97326 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cdh6P97326 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.3■□□□□ 0.36
Cdh6P97326 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdh6P97326 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh6P97326 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Cdh6P97326 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdh6P97326 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdh6P97326 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdh6P97326 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdh6P97326 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.3■□□□□ 0.36
Cdh6P97326 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms