Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.59■□□□□ 0.41
Trim43bP86448 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim43bP86448 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Gm11927-201ENSMUST00000118472 759 ntBASIC17.59■□□□□ 0.41
Trim43bP86448 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43bP86448 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.59■□□□□ 0.41
Trim43bP86448 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43bP86448 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trim43bP86448 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim43bP86448 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.58■□□□□ 0.4
Trim43bP86448 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Zfp783-201ENSMUST00000095946 670 ntBASIC17.58■□□□□ 0.4
Trim43bP86448 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43bP86448 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim43bP86448 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim43bP86448 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim43bP86448 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim43bP86448 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Trim43bP86448 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim43bP86448 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim43bP86448 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43bP86448 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.56■□□□□ 0.4
Trim43bP86448 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trim43bP86448 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim43bP86448 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim43bP86448 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.56■□□□□ 0.4
Trim43bP86448 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim43bP86448 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43bP86448 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43bP86448 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Gm6576-201ENSMUST00000169678 883 ntBASIC17.55■□□□□ 0.4
Trim43bP86448 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43bP86448 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim43bP86448 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim43bP86448 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim43bP86448 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43bP86448 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim43bP86448 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim43bP86448 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim43bP86448 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim43bP86448 Mir8112-201ENSMUST00000184382 131 ntBASIC17.54■□□□□ 0.4
Trim43bP86448 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Trim43bP86448 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim43bP86448 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim43bP86448 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms