Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Usp9xP70398 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp9xP70398 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Usp9xP70398 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp9xP70398 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp9xP70398 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp9xP70398 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp9xP70398 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.15□□□□□ -0.14
Usp9xP70398 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.15□□□□□ -0.14
Usp9xP70398 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp9xP70398 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.15□□□□□ -0.14
Usp9xP70398 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp9xP70398 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp9xP70398 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.15□□□□□ -0.14
Usp9xP70398 Gm10175-201ENSMUST00000086013 645 ntBASIC14.15□□□□□ -0.14
Usp9xP70398 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp9xP70398 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Usp9xP70398 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp9xP70398 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp9xP70398 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp9xP70398 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp9xP70398 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp9xP70398 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp9xP70398 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp9xP70398 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Usp9xP70398 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp9xP70398 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.13□□□□□ -0.15
Usp9xP70398 Gm14140-201ENSMUST00000119999 995 ntBASIC14.13□□□□□ -0.15
Usp9xP70398 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Usp9xP70398 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Gm15920-201ENSMUST00000118998 402 ntBASIC14.13□□□□□ -0.15
Usp9xP70398 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Usp9xP70398 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Usp9xP70398 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp9xP70398 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.13□□□□□ -0.15
Usp9xP70398 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.12□□□□□ -0.15
Usp9xP70398 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usp9xP70398 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp9xP70398 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.12□□□□□ -0.15
Usp9xP70398 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Fst-202ENSMUST00000223640 2612 ntBASIC14.12□□□□□ -0.15
Usp9xP70398 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp9xP70398 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp9xP70398 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.12□□□□□ -0.15
Usp9xP70398 Phf7-203ENSMUST00000226565 1971 ntBASIC14.12□□□□□ -0.15
Usp9xP70398 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp9xP70398 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp9xP70398 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms