Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Shox2P70390 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Shox2P70390 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shox2P70390 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Shox2P70390 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Shox2P70390 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Gm13401-201ENSMUST00000117074 291 ntBASIC16.97■□□□□ 0.31
Shox2P70390 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
Shox2P70390 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.97■□□□□ 0.31
Shox2P70390 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Shox2P70390 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shox2P70390 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Shox2P70390 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.96■□□□□ 0.31
Shox2P70390 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Shox2P70390 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.96■□□□□ 0.31
Shox2P70390 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shox2P70390 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Shox2P70390 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shox2P70390 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shox2P70390 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.96■□□□□ 0.3
Shox2P70390 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shox2P70390 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shox2P70390 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.96■□□□□ 0.3
Shox2P70390 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Shox2P70390 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.95■□□□□ 0.3
Shox2P70390 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.95■□□□□ 0.3
Shox2P70390 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Gm38285-201ENSMUST00000192928 922 ntBASIC16.95■□□□□ 0.3
Shox2P70390 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Shox2P70390 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shox2P70390 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.94■□□□□ 0.3
Shox2P70390 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.94■□□□□ 0.3
Shox2P70390 Gm26833-201ENSMUST00000180899 440 ntBASIC16.94■□□□□ 0.3
Shox2P70390 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Shox2P70390 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Shox2P70390 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
Shox2P70390 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shox2P70390 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shox2P70390 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms