Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Timm23-208ENSMUST00000226683 750 ntBASIC14.23□□□□□ -0.13
Pdlim4P70271 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim4P70271 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim4P70271 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim4P70271 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.22□□□□□ -0.13
Pdlim4P70271 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pdlim4P70271 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim4P70271 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim4P70271 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim4P70271 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.21□□□□□ -0.13
Pdlim4P70271 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdlim4P70271 Gm12085-201ENSMUST00000119263 940 ntBASIC14.21□□□□□ -0.13
Pdlim4P70271 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Mir8112-201ENSMUST00000184382 131 ntBASIC14.21□□□□□ -0.13
Pdlim4P70271 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim4P70271 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.21□□□□□ -0.14
Pdlim4P70271 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim4P70271 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.21□□□□□ -0.14
Pdlim4P70271 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim4P70271 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim4P70271 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim4P70271 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
Pdlim4P70271 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim4P70271 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Gm8969-201ENSMUST00000199694 526 ntBASIC14.2□□□□□ -0.14
Pdlim4P70271 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim4P70271 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim4P70271 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim4P70271 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim4P70271 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms