Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Traf6P70196 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Traf6P70196 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Traf6P70196 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Traf6P70196 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Traf6P70196 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.84■□□□□ 0.29
Traf6P70196 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.84■□□□□ 0.29
Traf6P70196 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.84■□□□□ 0.29
Traf6P70196 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Gm20760-201ENSMUST00000179197 648 ntBASIC16.84■□□□□ 0.29
Traf6P70196 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.84■□□□□ 0.29
Traf6P70196 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.84■□□□□ 0.29
Traf6P70196 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Traf6P70196 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Traf6P70196 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.84■□□□□ 0.29
Traf6P70196 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Traf6P70196 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Traf6P70196 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Traf6P70196 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.83■□□□□ 0.28
Traf6P70196 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.83■□□□□ 0.28
Traf6P70196 Gm20049-201ENSMUST00000219950 730 ntBASIC16.83■□□□□ 0.28
Traf6P70196 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.83■□□□□ 0.28
Traf6P70196 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Traf6P70196 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Traf6P70196 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.82■□□□□ 0.28
Traf6P70196 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.82■□□□□ 0.28
Traf6P70196 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Gm42545-201ENSMUST00000202755 922 ntBASIC16.82■□□□□ 0.28
Traf6P70196 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.82■□□□□ 0.28
Traf6P70196 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.82■□□□□ 0.28
Traf6P70196 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Traf6P70196 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.81■□□□□ 0.28
Traf6P70196 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
Traf6P70196 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Traf6P70196 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Gm13158-201ENSMUST00000122007 736 ntBASIC16.81■□□□□ 0.28
Traf6P70196 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Gm18025-201ENSMUST00000221733 862 ntBASIC16.81■□□□□ 0.28
Traf6P70196 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Traf6P70196 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Traf6P70196 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Traf6P70196 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Traf6P70196 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.8■□□□□ 0.28
Traf6P70196 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Traf6P70196 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Traf6P70196 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.8■□□□□ 0.28
Traf6P70196 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Traf6P70196 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Traf6P70196 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Traf6P70196 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf6P70196 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf6P70196 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Traf6P70196 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms