Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmgb1P63158 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.81■□□□□ 0.6
Hmgb1P63158 Gm10517-202ENSMUST00000192970 758 ntBASIC18.81■□□□□ 0.6
Hmgb1P63158 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hmgb1P63158 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hmgb1P63158 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgb1P63158 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmgb1P63158 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgb1P63158 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hmgb1P63158 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgb1P63158 Gm37856-201ENSMUST00000191634 999 ntBASIC18.8■□□□□ 0.6
Hmgb1P63158 Trmt13-210ENSMUST00000198454 880 ntBASIC18.8■□□□□ 0.6
Hmgb1P63158 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgb1P63158 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmgb1P63158 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgb1P63158 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgb1P63158 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmgb1P63158 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.79■□□□□ 0.6
Hmgb1P63158 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgb1P63158 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmgb1P63158 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hmgb1P63158 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.78■□□□□ 0.6
Hmgb1P63158 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hmgb1P63158 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.78■□□□□ 0.6
Hmgb1P63158 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Gm43183-201ENSMUST00000200632 547 ntBASIC18.78■□□□□ 0.6
Hmgb1P63158 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgb1P63158 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hmgb1P63158 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Gm12527-201ENSMUST00000117967 564 ntBASIC18.77■□□□□ 0.6
Hmgb1P63158 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.77■□□□□ 0.6
Hmgb1P63158 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgb1P63158 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgb1P63158 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgb1P63158 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Hmgb1P63158 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.77■□□□□ 0.59
Hmgb1P63158 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgb1P63158 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgb1P63158 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.77■□□□□ 0.59
Hmgb1P63158 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hmgb1P63158 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hmgb1P63158 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hmgb1P63158 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Gm24841-201ENSMUST00000158676 357 ntBASIC18.76■□□□□ 0.59
Hmgb1P63158 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.76■□□□□ 0.59
Hmgb1P63158 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hmgb1P63158 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms