Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a1P61620 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.06■□□□□ 0
Sec61a1P61620 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.06■□□□□ 0
Sec61a1P61620 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.06■□□□□ 0
Sec61a1P61620 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.06■□□□□ 0
Sec61a1P61620 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sec61a1P61620 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sec61a1P61620 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sec61a1P61620 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
Sec61a1P61620 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Sec61a1P61620 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sec61a1P61620 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sec61a1P61620 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.05■□□□□ -0
Sec61a1P61620 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.05■□□□□ -0
Sec61a1P61620 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Sec61a1P61620 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.05■□□□□ -0
Sec61a1P61620 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sec61a1P61620 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sec61a1P61620 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sec61a1P61620 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Sec61a1P61620 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.04■□□□□ -0
Sec61a1P61620 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.04■□□□□ -0
Sec61a1P61620 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.04■□□□□ -0
Sec61a1P61620 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.04■□□□□ -0
Sec61a1P61620 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.04■□□□□ -0
Sec61a1P61620 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sec61a1P61620 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.03■□□□□ -0
Sec61a1P61620 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sec61a1P61620 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.03■□□□□ -0
Sec61a1P61620 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a1P61620 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms