Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cks2P56390 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks2P56390 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cks2P56390 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cks2P56390 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.31□□□□□ -0.12
Cks2P56390 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cks2P56390 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cks2P56390 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cks2P56390 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.3□□□□□ -0.12
Cks2P56390 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cks2P56390 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cks2P56390 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.29□□□□□ -0.12
Cks2P56390 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cks2P56390 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.29□□□□□ -0.12
Cks2P56390 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.29□□□□□ -0.12
Cks2P56390 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Gm26524-201ENSMUST00000192339 390 ntBASIC14.29□□□□□ -0.12
Cks2P56390 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cks2P56390 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cks2P56390 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cks2P56390 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.29□□□□□ -0.12
Cks2P56390 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cks2P56390 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cks2P56390 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cks2P56390 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cks2P56390 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cks2P56390 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Mir6349-201ENSMUST00000184059 97 ntBASIC14.28□□□□□ -0.12
Cks2P56390 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cks2P56390 Rab3c-203ENSMUST00000224180 967 ntBASIC14.28□□□□□ -0.12
Cks2P56390 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.28□□□□□ -0.12
Cks2P56390 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cks2P56390 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cks2P56390 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.28□□□□□ -0.12
Cks2P56390 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.28□□□□□ -0.12
Cks2P56390 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Cks2P56390 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.27□□□□□ -0.12
Cks2P56390 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.27□□□□□ -0.12
Cks2P56390 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cks2P56390 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cks2P56390 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks2P56390 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cks2P56390 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cks2P56390 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.27□□□□□ -0.13
Cks2P56390 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms