Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Cdkn2bP55271 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.41■□□□□ 0.22
Cdkn2bP55271 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkn2bP55271 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkn2bP55271 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cdkn2bP55271 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdkn2bP55271 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Cdkn2bP55271 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdkn2bP55271 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.38■□□□□ 0.21
Cdkn2bP55271 Gm12896-201ENSMUST00000118430 226 ntBASIC16.38■□□□□ 0.21
Cdkn2bP55271 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdkn2bP55271 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdkn2bP55271 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Gm18025-201ENSMUST00000221733 862 ntBASIC16.37■□□□□ 0.21
Cdkn2bP55271 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cdkn2bP55271 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cdkn2bP55271 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms