Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NcanP55066 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.07■□□□□ 0.48
NcanP55066 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.07■□□□□ 0.48
NcanP55066 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.07■□□□□ 0.48
NcanP55066 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NcanP55066 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NcanP55066 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NcanP55066 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.06■□□□□ 0.48
NcanP55066 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.06■□□□□ 0.48
NcanP55066 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.06■□□□□ 0.48
NcanP55066 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.06■□□□□ 0.48
NcanP55066 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
NcanP55066 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.06■□□□□ 0.48
NcanP55066 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NcanP55066 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NcanP55066 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NcanP55066 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NcanP55066 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.05■□□□□ 0.48
NcanP55066 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Mir8112-201ENSMUST00000184382 131 ntBASIC18.05■□□□□ 0.48
NcanP55066 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.05■□□□□ 0.48
NcanP55066 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NcanP55066 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NcanP55066 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NcanP55066 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.05■□□□□ 0.48
NcanP55066 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NcanP55066 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NcanP55066 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NcanP55066 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.04■□□□□ 0.48
NcanP55066 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.04■□□□□ 0.48
NcanP55066 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.04■□□□□ 0.48
NcanP55066 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NcanP55066 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.03■□□□□ 0.48
NcanP55066 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NcanP55066 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NcanP55066 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.02■□□□□ 0.48
NcanP55066 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NcanP55066 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NcanP55066 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.02■□□□□ 0.48
NcanP55066 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.02■□□□□ 0.48
NcanP55066 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NcanP55066 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.02■□□□□ 0.48
NcanP55066 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.02■□□□□ 0.48
NcanP55066 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.02■□□□□ 0.48
NcanP55066 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.02■□□□□ 0.48
NcanP55066 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms