Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacnb3P54285 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacnb3P54285 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cacnb3P54285 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cacnb3P54285 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Cacnb3P54285 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cacnb3P54285 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacnb3P54285 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.92■□□□□ 0.78
Cacnb3P54285 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.92■□□□□ 0.78
Cacnb3P54285 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cacnb3P54285 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cacnb3P54285 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacnb3P54285 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.92■□□□□ 0.78
Cacnb3P54285 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.91■□□□□ 0.78
Cacnb3P54285 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.91■□□□□ 0.78
Cacnb3P54285 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Cacnb3P54285 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cacnb3P54285 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cacnb3P54285 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.91■□□□□ 0.78
Cacnb3P54285 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cacnb3P54285 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacnb3P54285 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.9■□□□□ 0.78
Cacnb3P54285 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Cacnb3P54285 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.9■□□□□ 0.78
Cacnb3P54285 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.9■□□□□ 0.78
Cacnb3P54285 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cacnb3P54285 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Gm13186-201ENSMUST00000118031 316 ntBASIC19.89■□□□□ 0.77
Cacnb3P54285 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacnb3P54285 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.89■□□□□ 0.77
Cacnb3P54285 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.89■□□□□ 0.77
Cacnb3P54285 Mzt1-203ENSMUST00000227948 952 ntBASIC19.89■□□□□ 0.77
Cacnb3P54285 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacnb3P54285 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cacnb3P54285 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cacnb3P54285 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.89■□□□□ 0.77
Cacnb3P54285 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cacnb3P54285 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Cacnb3P54285 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms