Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sox3P53784 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox3P53784 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.36■□□□□ 0.21
Sox3P53784 Gm2274-201ENSMUST00000184539 609 ntBASIC16.36■□□□□ 0.21
Sox3P53784 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox3P53784 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sox3P53784 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox3P53784 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Sox3P53784 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox3P53784 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox3P53784 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.35■□□□□ 0.21
Sox3P53784 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.35■□□□□ 0.21
Sox3P53784 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox3P53784 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox3P53784 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox3P53784 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox3P53784 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.35■□□□□ 0.21
Sox3P53784 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox3P53784 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.34■□□□□ 0.21
Sox3P53784 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.34■□□□□ 0.21
Sox3P53784 Mir6349-201ENSMUST00000184059 97 ntBASIC16.34■□□□□ 0.21
Sox3P53784 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.34■□□□□ 0.21
Sox3P53784 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sox3P53784 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sox3P53784 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.34■□□□□ 0.21
Sox3P53784 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.34■□□□□ 0.21
Sox3P53784 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox3P53784 Gm38285-201ENSMUST00000192928 922 ntBASIC16.33■□□□□ 0.2
Sox3P53784 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.33■□□□□ 0.2
Sox3P53784 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.33■□□□□ 0.2
Sox3P53784 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sox3P53784 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.33■□□□□ 0.2
Sox3P53784 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.33■□□□□ 0.2
Sox3P53784 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sox3P53784 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.33■□□□□ 0.2
Sox3P53784 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox3P53784 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox3P53784 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sox3P53784 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox3P53784 Gm17807-201ENSMUST00000186869 298 ntBASIC16.32■□□□□ 0.2
Sox3P53784 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.32■□□□□ 0.2
Sox3P53784 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox3P53784 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox3P53784 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox3P53784 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox3P53784 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.31■□□□□ 0.2
Sox3P53784 Gm43514-201ENSMUST00000198852 424 ntBASIC16.31■□□□□ 0.2
Sox3P53784 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sox3P53784 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms