Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sox1P53783 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sox1P53783 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.47■□□□□ 0.39
Sox1P53783 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.47■□□□□ 0.39
Sox1P53783 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.47■□□□□ 0.39
Sox1P53783 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sox1P53783 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.47■□□□□ 0.39
Sox1P53783 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.47■□□□□ 0.39
Sox1P53783 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox1P53783 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.47■□□□□ 0.39
Sox1P53783 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sox1P53783 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.46■□□□□ 0.39
Sox1P53783 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Gm11336-201ENSMUST00000118168 334 ntBASIC17.46■□□□□ 0.39
Sox1P53783 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sox1P53783 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox1P53783 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox1P53783 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox1P53783 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox1P53783 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.45■□□□□ 0.38
Sox1P53783 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox1P53783 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Sox1P53783 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox1P53783 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.45■□□□□ 0.38
Sox1P53783 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox1P53783 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.45■□□□□ 0.38
Sox1P53783 Gm6089-201ENSMUST00000197666 938 ntBASIC17.45■□□□□ 0.38
Sox1P53783 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox1P53783 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sox1P53783 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox1P53783 Gm15165-201ENSMUST00000118140 502 ntBASIC17.44■□□□□ 0.38
Sox1P53783 Gm15173-201ENSMUST00000122049 433 ntBASIC17.44■□□□□ 0.38
Sox1P53783 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox1P53783 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.44■□□□□ 0.38
Sox1P53783 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sox1P53783 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox1P53783 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Rprl3-201ENSMUST00000157400 290 ntBASIC17.43■□□□□ 0.38
Sox1P53783 Chchd1-203ENSMUST00000224633 557 ntBASIC17.43■□□□□ 0.38
Sox1P53783 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox1P53783 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox1P53783 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sox1P53783 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox1P53783 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox1P53783 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms