Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Mmp9P41245 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.39□□□□□ -0.11
Mmp9P41245 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.39□□□□□ -0.11
Mmp9P41245 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Mmp9P41245 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Mmp9P41245 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp9P41245 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Mmp9P41245 Gm12933-201ENSMUST00000120203 872 ntBASIC14.38□□□□□ -0.11
Mmp9P41245 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp9P41245 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
Mmp9P41245 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mmp9P41245 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Mmp9P41245 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp9P41245 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.37□□□□□ -0.11
Mmp9P41245 Gm9988-201ENSMUST00000069786 435 ntBASIC14.37□□□□□ -0.11
Mmp9P41245 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.37□□□□□ -0.11
Mmp9P41245 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.37□□□□□ -0.11
Mmp9P41245 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.37□□□□□ -0.11
Mmp9P41245 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp9P41245 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.36□□□□□ -0.11
Mmp9P41245 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.36□□□□□ -0.11
Mmp9P41245 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp9P41245 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.36□□□□□ -0.11
Mmp9P41245 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp9P41245 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp9P41245 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp9P41245 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp9P41245 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mmp9P41245 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp9P41245 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.35□□□□□ -0.11
Mmp9P41245 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp9P41245 Nespas-201ENSMUST00000143738 1083 ntBASIC14.35□□□□□ -0.11
Mmp9P41245 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.35□□□□□ -0.11
Mmp9P41245 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp9P41245 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp9P41245 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms