Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.18□□□□□ -0.14
Abca1P41233 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abca1P41233 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Abca1P41233 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Abca1P41233 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Abca1P41233 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Abca1P41233 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abca1P41233 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.17□□□□□ -0.14
Abca1P41233 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Abca1P41233 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.16□□□□□ -0.14
Abca1P41233 Gm17808-201ENSMUST00000200859 894 ntBASIC14.16□□□□□ -0.14
Abca1P41233 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Abca1P41233 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Abca1P41233 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.16□□□□□ -0.14
Abca1P41233 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Abca1P41233 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Abca1P41233 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.16□□□□□ -0.14
Abca1P41233 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Abca1P41233 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Abca1P41233 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Abca1P41233 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abca1P41233 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Abca1P41233 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Abca1P41233 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.15□□□□□ -0.14
Abca1P41233 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.15□□□□□ -0.14
Abca1P41233 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Abca1P41233 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abca1P41233 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Abca1P41233 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Abca1P41233 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Abca1P41233 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abca1P41233 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Gm7370-201ENSMUST00000219471 767 ntBASIC14.13□□□□□ -0.15
Abca1P41233 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abca1P41233 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Abca1P41233 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms