Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd9P40240 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd9P40240 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd9P40240 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cd9P40240 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd9P40240 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.84■□□□□ 0.29
Cd9P40240 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Cd9P40240 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd9P40240 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cd9P40240 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd9P40240 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.83■□□□□ 0.28
Cd9P40240 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cd9P40240 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.83■□□□□ 0.28
Cd9P40240 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.83■□□□□ 0.28
Cd9P40240 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.83■□□□□ 0.28
Cd9P40240 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd9P40240 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cd9P40240 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cd9P40240 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd9P40240 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cd9P40240 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.82■□□□□ 0.28
Cd9P40240 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.82■□□□□ 0.28
Cd9P40240 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd9P40240 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd9P40240 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Cd9P40240 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Cd9P40240 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.82■□□□□ 0.28
Cd9P40240 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.81■□□□□ 0.28
Cd9P40240 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.81■□□□□ 0.28
Cd9P40240 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.81■□□□□ 0.28
Cd9P40240 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cd9P40240 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd9P40240 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cd9P40240 Gm18958-201ENSMUST00000174258 762 ntBASIC16.8■□□□□ 0.28
Cd9P40240 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.8■□□□□ 0.28
Cd9P40240 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd9P40240 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cd9P40240 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cd9P40240 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd9P40240 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms