Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox5P35710 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sox5P35710 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sox5P35710 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sox5P35710 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Sox5P35710 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sox5P35710 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Sox5P35710 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Sox5P35710 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sox5P35710 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.7■□□□□ 0.58
Sox5P35710 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sox5P35710 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Sox5P35710 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sox5P35710 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.69■□□□□ 0.58
Sox5P35710 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.69■□□□□ 0.58
Sox5P35710 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox5P35710 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sox5P35710 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox5P35710 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Sox5P35710 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox5P35710 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox5P35710 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sox5P35710 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.66■□□□□ 0.58
Sox5P35710 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Gm18025-201ENSMUST00000221733 862 ntBASIC18.66■□□□□ 0.58
Sox5P35710 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sox5P35710 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox5P35710 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox5P35710 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox5P35710 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sox5P35710 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox5P35710 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.65■□□□□ 0.58
Sox5P35710 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms