Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm23634-201ENSMUST00000175071 91 ntBASIC16.03■□□□□ 0.16
RetP35546 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.03■□□□□ 0.16
RetP35546 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.03■□□□□ 0.16
RetP35546 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RetP35546 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RetP35546 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RetP35546 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RetP35546 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
RetP35546 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RetP35546 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RetP35546 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
RetP35546 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RetP35546 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.02■□□□□ 0.16
RetP35546 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RetP35546 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RetP35546 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.02■□□□□ 0.15
RetP35546 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RetP35546 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RetP35546 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RetP35546 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.01■□□□□ 0.15
RetP35546 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.01■□□□□ 0.15
RetP35546 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Gm10517-202ENSMUST00000192970 758 ntBASIC16.01■□□□□ 0.15
RetP35546 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.01■□□□□ 0.15
RetP35546 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.01■□□□□ 0.15
RetP35546 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.01■□□□□ 0.15
RetP35546 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RetP35546 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RetP35546 Gm43272-201ENSMUST00000200599 1584 ntBASIC16■□□□□ 0.15
RetP35546 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RetP35546 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Gm10013-201ENSMUST00000106074 672 ntBASIC16■□□□□ 0.15
RetP35546 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Gm43338-201ENSMUST00000198617 2223 ntBASIC16■□□□□ 0.15
RetP35546 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16■□□□□ 0.15
RetP35546 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RetP35546 Gm37820-201ENSMUST00000194021 2147 ntBASIC16■□□□□ 0.15
RetP35546 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RetP35546 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.99■□□□□ 0.15
RetP35546 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
RetP35546 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.99■□□□□ 0.15
RetP35546 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.99■□□□□ 0.15
RetP35546 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RetP35546 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.99■□□□□ 0.15
RetP35546 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RetP35546 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.99■□□□□ 0.15
RetP35546 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.99■□□□□ 0.15
RetP35546 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RetP35546 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RetP35546 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RetP35546 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RetP35546 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RetP35546 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms