Protein–RNA interactions for Protein: P35235

Ptpn11, Tyrosine-protein phosphatase non-receptor type 11, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn11P35235 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptpn11P35235 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.68■□□□□ 0.58
Ptpn11P35235 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ptpn11P35235 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ptpn11P35235 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.67■□□□□ 0.58
Ptpn11P35235 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.67■□□□□ 0.58
Ptpn11P35235 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ptpn11P35235 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptpn11P35235 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Ptpn11P35235 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptpn11P35235 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Ptpn11P35235 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ptpn11P35235 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Ptpn11P35235 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ptpn11P35235 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.65■□□□□ 0.58
Ptpn11P35235 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ptpn11P35235 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ptpn11P35235 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ptpn11P35235 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.64■□□□□ 0.57
Ptpn11P35235 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Gm24589-201ENSMUST00000116692 94 ntBASIC18.64■□□□□ 0.57
Ptpn11P35235 Olfr129-201ENSMUST00000122318 993 ntBASIC18.64■□□□□ 0.57
Ptpn11P35235 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.64■□□□□ 0.57
Ptpn11P35235 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.64■□□□□ 0.57
Ptpn11P35235 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ptpn11P35235 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ptpn11P35235 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.63■□□□□ 0.57
Ptpn11P35235 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ptpn11P35235 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptpn11P35235 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptpn11P35235 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ptpn11P35235 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ptpn11P35235 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ptpn11P35235 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ptpn11P35235 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptpn11P35235 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptpn11P35235 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ptpn11P35235 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms