Protein–RNA interactions for Protein: P32067

Ssb, Lupus La protein homolog, mousemouse

Known RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SsbP32067 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SsbP32067 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SsbP32067 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.19■□□□□ 0.66
SsbP32067 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SsbP32067 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SsbP32067 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Gm13216-201ENSMUST00000117145 591 ntBASIC19.18■□□□□ 0.66
SsbP32067 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SsbP32067 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SsbP32067 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SsbP32067 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SsbP32067 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SsbP32067 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SsbP32067 Gm15378-201ENSMUST00000121894 207 ntBASIC19.17■□□□□ 0.66
SsbP32067 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SsbP32067 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SsbP32067 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SsbP32067 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
SsbP32067 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SsbP32067 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SsbP32067 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.16■□□□□ 0.66
SsbP32067 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SsbP32067 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.16■□□□□ 0.66
SsbP32067 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SsbP32067 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.16■□□□□ 0.66
SsbP32067 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SsbP32067 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SsbP32067 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SsbP32067 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.15■□□□□ 0.66
SsbP32067 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SsbP32067 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SsbP32067 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SsbP32067 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
SsbP32067 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SsbP32067 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SsbP32067 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SsbP32067 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SsbP32067 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SsbP32067 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.14■□□□□ 0.65
SsbP32067 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
SsbP32067 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SsbP32067 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SsbP32067 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SsbP32067 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SsbP32067 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms