Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.73□□□□□ -0.05
Slc6a1P31648 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Slc6a1P31648 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Slc6a1P31648 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.73□□□□□ -0.05
Slc6a1P31648 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Slc6a1P31648 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.72□□□□□ -0.05
Slc6a1P31648 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Slc6a1P31648 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Slc6a1P31648 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.71□□□□□ -0.05
Slc6a1P31648 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Slc6a1P31648 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Slc6a1P31648 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.71□□□□□ -0.05
Slc6a1P31648 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.71□□□□□ -0.05
Slc6a1P31648 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.71□□□□□ -0.05
Slc6a1P31648 Gm29257-201ENSMUST00000186115 639 ntBASIC14.71□□□□□ -0.05
Slc6a1P31648 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.71□□□□□ -0.05
Slc6a1P31648 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Slc6a1P31648 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Slc6a1P31648 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm7290-201ENSMUST00000104990 617 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm12918-201ENSMUST00000120234 636 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm15710-201ENSMUST00000121821 636 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm5075-201ENSMUST00000196916 622 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Slc6a1P31648 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Slc6a1P31648 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.7□□□□□ -0.06
Slc6a1P31648 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Slc6a1P31648 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Slc6a1P31648 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms