Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nckap1P28660 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nckap1P28660 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nckap1P28660 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Gm7284-201ENSMUST00000131667 944 ntBASIC17.03■□□□□ 0.32
Nckap1P28660 Gm26039-201ENSMUST00000158152 144 ntBASIC17.03■□□□□ 0.32
Nckap1P28660 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nckap1P28660 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nckap1P28660 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nckap1P28660 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.03■□□□□ 0.32
Nckap1P28660 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nckap1P28660 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nckap1P28660 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nckap1P28660 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.02■□□□□ 0.32
Nckap1P28660 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nckap1P28660 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nckap1P28660 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.02■□□□□ 0.32
Nckap1P28660 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.02■□□□□ 0.32
Nckap1P28660 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nckap1P28660 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nckap1P28660 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.02■□□□□ 0.32
Nckap1P28660 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nckap1P28660 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nckap1P28660 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nckap1P28660 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Nckap1P28660 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nckap1P28660 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nckap1P28660 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nckap1P28660 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.01■□□□□ 0.31
Nckap1P28660 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.01■□□□□ 0.31
Nckap1P28660 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nckap1P28660 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nckap1P28660 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17■□□□□ 0.31
Nckap1P28660 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17■□□□□ 0.31
Nckap1P28660 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17■□□□□ 0.31
Nckap1P28660 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Grk6-206ENSMUST00000224995 2971 ntBASIC17■□□□□ 0.31
Nckap1P28660 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nckap1P28660 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.99■□□□□ 0.31
Nckap1P28660 Gm27704-201ENSMUST00000185094 107 ntBASIC16.99■□□□□ 0.31
Nckap1P28660 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Nckap1P28660 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.99■□□□□ 0.31
Nckap1P28660 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nckap1P28660 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.99■□□□□ 0.31
Nckap1P28660 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms