Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.49■□□□□ 0.07
Cd40P27512 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cd40P27512 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cd40P27512 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cd40P27512 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Cd40P27512 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.48■□□□□ 0.07
Cd40P27512 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.48■□□□□ 0.07
Cd40P27512 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.48■□□□□ 0.07
Cd40P27512 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.48■□□□□ 0.07
Cd40P27512 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cd40P27512 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.48■□□□□ 0.07
Cd40P27512 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cd40P27512 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.47■□□□□ 0.07
Cd40P27512 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.47■□□□□ 0.07
Cd40P27512 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.47■□□□□ 0.07
Cd40P27512 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.47■□□□□ 0.07
Cd40P27512 Gm18958-201ENSMUST00000174258 762 ntBASIC15.47■□□□□ 0.07
Cd40P27512 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cd40P27512 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.47■□□□□ 0.07
Cd40P27512 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
Cd40P27512 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd40P27512 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cd40P27512 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Cd40P27512 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.46■□□□□ 0.07
Cd40P27512 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Cd40P27512 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cd40P27512 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cd40P27512 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.46■□□□□ 0.07
Cd40P27512 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cd40P27512 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
Cd40P27512 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cd40P27512 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cd40P27512 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cd40P27512 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.46■□□□□ 0.06
Cd40P27512 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.45■□□□□ 0.06
Cd40P27512 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.45■□□□□ 0.06
Cd40P27512 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cd40P27512 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd40P27512 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.45■□□□□ 0.06
Cd40P27512 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd40P27512 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd40P27512 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.44■□□□□ 0.06
Cd40P27512 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms