Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm17661-201ENSMUST00000170317 270 ntBASIC15.25■□□□□ 0.03
P06344 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P06344 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.25■□□□□ 0.03
P06344 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P06344 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06344 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
P06344 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.24■□□□□ 0.03
P06344 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P06344 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.24■□□□□ 0.03
P06344 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Gm45058-201ENSMUST00000205810 766 ntBASIC15.24■□□□□ 0.03
P06344 Il3ra-202ENSMUST00000223589 738 ntBASIC15.24■□□□□ 0.03
P06344 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
P06344 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06344 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.23■□□□□ 0.03
P06344 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.23■□□□□ 0.03
P06344 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P06344 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.22■□□□□ 0.03
P06344 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.22■□□□□ 0.03
P06344 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.22■□□□□ 0.03
P06344 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P06344 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
P06344 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
P06344 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
P06344 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Mir5130-201ENSMUST00000175160 84 ntBASIC15.21■□□□□ 0.03
P06344 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.21■□□□□ 0.03
P06344 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P06344 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.21■□□□□ 0.03
P06344 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
P06344 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P06344 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.2■□□□□ 0.02
P06344 Gm16061-201ENSMUST00000122167 857 ntBASIC15.2■□□□□ 0.02
P06344 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms