Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.68□□□□□ -0.06
P04946 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.68□□□□□ -0.06
P04946 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
P04946 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
P04946 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
P04946 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
P04946 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
P04946 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.67□□□□□ -0.06
P04946 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.67□□□□□ -0.06
P04946 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.67□□□□□ -0.06
P04946 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.67□□□□□ -0.06
P04946 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.67□□□□□ -0.06
P04946 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
P04946 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
P04946 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
P04946 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.66□□□□□ -0.06
P04946 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
P04946 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.66□□□□□ -0.06
P04946 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.66□□□□□ -0.06
P04946 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
P04946 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Gm7367-201ENSMUST00000057611 492 ntBASIC14.66□□□□□ -0.06
P04946 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
P04946 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
P04946 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.66□□□□□ -0.06
P04946 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
P04946 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
P04946 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.65□□□□□ -0.06
P04946 Gm29518-201ENSMUST00000190858 372 ntBASIC14.65□□□□□ -0.06
P04946 Gm37722-201ENSMUST00000193757 208 ntBASIC14.65□□□□□ -0.06
P04946 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.65□□□□□ -0.06
P04946 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
P04946 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.65□□□□□ -0.06
P04946 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.65□□□□□ -0.06
P04946 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P04946 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
P04946 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.64□□□□□ -0.07
P04946 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Gm13186-201ENSMUST00000118031 316 ntBASIC14.64□□□□□ -0.07
P04946 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.64□□□□□ -0.07
P04946 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
P04946 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.64□□□□□ -0.07
P04946 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P04946 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04946 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms