Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P03980 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.23□□□□□ -0.29
P03980 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.23□□□□□ -0.29
P03980 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Gm44549-201ENSMUST00000208351 577 ntBASIC13.23□□□□□ -0.29
P03980 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.23□□□□□ -0.29
P03980 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P03980 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.23□□□□□ -0.29
P03980 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Flg-201ENSMUST00000050758 1488 ntBASIC13.23□□□□□ -0.29
P03980 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P03980 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P03980 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P03980 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
P03980 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.22□□□□□ -0.29
P03980 Gm42642-201ENSMUST00000200683 355 ntBASIC13.22□□□□□ -0.29
P03980 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.22□□□□□ -0.29
P03980 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.22□□□□□ -0.29
P03980 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P03980 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P03980 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P03980 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P03980 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P03980 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
P03980 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
P03980 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Gm6211-202ENSMUST00000167849 925 ntBASIC13.21□□□□□ -0.29
P03980 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.21□□□□□ -0.29
P03980 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.21□□□□□ -0.29
P03980 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P03980 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.21□□□□□ -0.29
P03980 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P03980 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
P03980 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P03980 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
P03980 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
P03980 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
P03980 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.2□□□□□ -0.3
P03980 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.2□□□□□ -0.3
P03980 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P03980 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P03980 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms