Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
P01852 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.63■□□□□ 0.09
P01852 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.63■□□□□ 0.09
P01852 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
P01852 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.63■□□□□ 0.09
P01852 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
P01852 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
P01852 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.62■□□□□ 0.09
P01852 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.62■□□□□ 0.09
P01852 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
P01852 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.62■□□□□ 0.09
P01852 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.62■□□□□ 0.09
P01852 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.62■□□□□ 0.09
P01852 Mir7071-201ENSMUST00000184847 69 ntBASIC15.62■□□□□ 0.09
P01852 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.62■□□□□ 0.09
P01852 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.62■□□□□ 0.09
P01852 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
P01852 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
P01852 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.62■□□□□ 0.09
P01852 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
P01852 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.62■□□□□ 0.09
P01852 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
P01852 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
P01852 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
P01852 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
P01852 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
P01852 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
P01852 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
P01852 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Gm7638-201ENSMUST00000121348 967 ntBASIC15.6■□□□□ 0.09
P01852 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
P01852 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Gm43799-201ENSMUST00000201845 579 ntBASIC15.6■□□□□ 0.09
P01852 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
P01852 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.6■□□□□ 0.09
P01852 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
P01852 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms