Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.54□□□□□ -0.24
P01788 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.54□□□□□ -0.24
P01788 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.54□□□□□ -0.24
P01788 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.54□□□□□ -0.24
P01788 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01788 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P01788 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.53□□□□□ -0.24
P01788 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.53□□□□□ -0.24
P01788 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.53□□□□□ -0.24
P01788 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
P01788 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P01788 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P01788 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P01788 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Gm26524-201ENSMUST00000192339 390 ntBASIC13.53□□□□□ -0.24
P01788 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
P01788 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
P01788 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.53□□□□□ -0.24
P01788 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.53□□□□□ -0.24
P01788 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01788 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01788 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.25
P01788 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.52□□□□□ -0.25
P01788 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.52□□□□□ -0.25
P01788 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Rab3c-203ENSMUST00000224180 967 ntBASIC13.52□□□□□ -0.25
P01788 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.52□□□□□ -0.25
P01788 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
P01788 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.52□□□□□ -0.25
P01788 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
P01788 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01788 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.51□□□□□ -0.25
P01788 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.51□□□□□ -0.25
P01788 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P01788 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.51□□□□□ -0.25
P01788 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P01788 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Gm18284-201ENSMUST00000172604 624 ntBASIC13.51□□□□□ -0.25
P01788 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.51□□□□□ -0.25
P01788 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.51□□□□□ -0.25
P01788 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.51□□□□□ -0.25
P01788 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P01788 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.51□□□□□ -0.25
P01788 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P01788 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01788 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P01788 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01788 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P01788 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms