Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Odf3b-204ENSMUST00000227834 930 ntBASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igh-VJ558P01758 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igh-VJ558P01758 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Gm22240-201ENSMUST00000175225 82 ntBASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Gm27000-201ENSMUST00000182943 842 ntBASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Haglr-201ENSMUST00000100000 2085 ntBASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igh-VJ558P01758 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Gm21814-202ENSMUST00000203277 873 ntBASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Gm3375-201ENSMUST00000203929 796 ntBASIC14.76□□□□□ -0.05
Igh-VJ558P01758 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igh-VJ558P01758 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Gm7791-201ENSMUST00000219066 539 ntBASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igh-VJ558P01758 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms