Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.17■□□□□ 0.18
Matn4O89029 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Matn4O89029 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Matn4O89029 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Matn4O89029 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Gm27405-201ENSMUST00000184201 112 ntBASIC16.16■□□□□ 0.18
Matn4O89029 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.16■□□□□ 0.18
Matn4O89029 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Matn4O89029 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Matn4O89029 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Matn4O89029 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.16■□□□□ 0.18
Matn4O89029 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Matn4O89029 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Gm12933-201ENSMUST00000120203 872 ntBASIC16.15■□□□□ 0.18
Matn4O89029 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Matn4O89029 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.15■□□□□ 0.18
Matn4O89029 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Matn4O89029 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Matn4O89029 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Gm11249-201ENSMUST00000117071 859 ntBASIC16.14■□□□□ 0.17
Matn4O89029 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.14■□□□□ 0.17
Matn4O89029 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.14■□□□□ 0.17
Matn4O89029 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Matn4O89029 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Matn4O89029 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Gm8495-201ENSMUST00000188740 694 ntBASIC16.13■□□□□ 0.17
Matn4O89029 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.13■□□□□ 0.17
Matn4O89029 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Dancr-204ENSMUST00000132389 2347 ntBASIC16.13■□□□□ 0.17
Matn4O89029 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Matn4O89029 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Matn4O89029 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Matn4O89029 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Matn4O89029 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms