Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hcn3O88705 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.4■□□□□ 0.22
Hcn3O88705 Gm7290-201ENSMUST00000104990 617 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Gm12918-201ENSMUST00000120234 636 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Gm15710-201ENSMUST00000121821 636 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Gm5075-201ENSMUST00000196916 622 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.4■□□□□ 0.22
Hcn3O88705 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.4■□□□□ 0.22
Hcn3O88705 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hcn3O88705 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hcn3O88705 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hcn3O88705 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Hcn3O88705 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Gm12933-201ENSMUST00000120203 872 ntBASIC16.39■□□□□ 0.21
Hcn3O88705 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn3O88705 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.39■□□□□ 0.21
Hcn3O88705 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.39■□□□□ 0.21
Hcn3O88705 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.39■□□□□ 0.21
Hcn3O88705 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hcn3O88705 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.38■□□□□ 0.21
Hcn3O88705 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.38■□□□□ 0.21
Hcn3O88705 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Mir5133-201ENSMUST00000174955 77 ntBASIC16.38■□□□□ 0.21
Hcn3O88705 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hcn3O88705 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hcn3O88705 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hcn3O88705 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hcn3O88705 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Hcn3O88705 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.37■□□□□ 0.21
Hcn3O88705 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hcn3O88705 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hcn3O88705 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hcn3O88705 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.36■□□□□ 0.21
Hcn3O88705 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Hcn3O88705 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hcn3O88705 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms