Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldn1O88551 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cldn1O88551 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cldn1O88551 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cldn1O88551 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Gm11950-201ENSMUST00000121615 838 ntBASIC14.65□□□□□ -0.06
Cldn1O88551 Gm43514-201ENSMUST00000198852 424 ntBASIC14.65□□□□□ -0.06
Cldn1O88551 Gm18115-201ENSMUST00000221209 621 ntBASIC14.65□□□□□ -0.06
Cldn1O88551 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.65□□□□□ -0.06
Cldn1O88551 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cldn1O88551 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.65□□□□□ -0.06
Cldn1O88551 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldn1O88551 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldn1O88551 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.65□□□□□ -0.07
Cldn1O88551 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cldn1O88551 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cldn1O88551 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.64□□□□□ -0.07
Cldn1O88551 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Gm11355-201ENSMUST00000121120 306 ntBASIC14.64□□□□□ -0.07
Cldn1O88551 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cldn1O88551 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cldn1O88551 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cldn1O88551 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cldn1O88551 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cldn1O88551 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldn1O88551 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.63□□□□□ -0.07
Cldn1O88551 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cldn1O88551 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldn1O88551 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.63□□□□□ -0.07
Cldn1O88551 Gm24841-201ENSMUST00000158676 357 ntBASIC14.63□□□□□ -0.07
Cldn1O88551 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.63□□□□□ -0.07
Cldn1O88551 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.63□□□□□ -0.07
Cldn1O88551 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cldn1O88551 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cldn1O88551 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cldn1O88551 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.62□□□□□ -0.07
Cldn1O88551 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cldn1O88551 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cldn1O88551 Gm27357-201ENSMUST00000183754 135 ntBASIC14.62□□□□□ -0.07
Cldn1O88551 Gm6443-201ENSMUST00000203599 874 ntBASIC14.62□□□□□ -0.07
Cldn1O88551 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cldn1O88551 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cldn1O88551 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cldn1O88551 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms