Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cops4O88544 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Cops4O88544 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cops4O88544 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cops4O88544 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.82■□□□□ 0.12
Cops4O88544 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cops4O88544 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.82■□□□□ 0.12
Cops4O88544 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cops4O88544 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cops4O88544 Gm42569-201ENSMUST00000200539 472 ntBASIC15.82■□□□□ 0.12
Cops4O88544 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.82■□□□□ 0.12
Cops4O88544 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Cops4O88544 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cops4O88544 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.82■□□□□ 0.12
Cops4O88544 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cops4O88544 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.81■□□□□ 0.12
Cops4O88544 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.81■□□□□ 0.12
Cops4O88544 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cops4O88544 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.81■□□□□ 0.12
Cops4O88544 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cops4O88544 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cops4O88544 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.8■□□□□ 0.12
Cops4O88544 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cops4O88544 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.8■□□□□ 0.12
Cops4O88544 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Cops4O88544 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.8■□□□□ 0.12
Cops4O88544 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cops4O88544 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cops4O88544 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cops4O88544 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.79■□□□□ 0.12
Cops4O88544 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cops4O88544 Gm29791-202ENSMUST00000207888 369 ntBASIC15.79■□□□□ 0.12
Cops4O88544 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cops4O88544 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.79■□□□□ 0.12
Cops4O88544 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.78■□□□□ 0.12
Cops4O88544 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.78■□□□□ 0.12
Cops4O88544 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cops4O88544 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.78■□□□□ 0.12
Cops4O88544 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms