Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1hO88427 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1hO88427 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.64■□□□□ 0.25
Cacna1hO88427 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1hO88427 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna1hO88427 Gm20949-201ENSMUST00000206478 952 ntBASIC16.64■□□□□ 0.25
Cacna1hO88427 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.64■□□□□ 0.25
Cacna1hO88427 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.63■□□□□ 0.25
Cacna1hO88427 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.63■□□□□ 0.25
Cacna1hO88427 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Cacna1hO88427 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1hO88427 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.63■□□□□ 0.25
Cacna1hO88427 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Gm4535-201ENSMUST00000182274 558 ntBASIC16.62■□□□□ 0.25
Cacna1hO88427 Gm5745-201ENSMUST00000183748 313 ntBASIC16.62■□□□□ 0.25
Cacna1hO88427 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Gm10355-201ENSMUST00000097146 517 ntBASIC16.62■□□□□ 0.25
Cacna1hO88427 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.62■□□□□ 0.25
Cacna1hO88427 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.62■□□□□ 0.25
Cacna1hO88427 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1hO88427 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.62■□□□□ 0.25
Cacna1hO88427 AV026068-213ENSMUST00000223675 1171 ntBASIC16.62■□□□□ 0.25
Cacna1hO88427 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.62■□□□□ 0.25
Cacna1hO88427 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cacna1hO88427 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.61■□□□□ 0.25
Cacna1hO88427 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Golph3-202ENSMUST00000226517 2359 ntBASIC16.61■□□□□ 0.25
Cacna1hO88427 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.61■□□□□ 0.25
Cacna1hO88427 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.61■□□□□ 0.25
Cacna1hO88427 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1hO88427 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.6■□□□□ 0.25
Cacna1hO88427 Phf7-203ENSMUST00000226565 1971 ntBASIC16.6■□□□□ 0.25
Cacna1hO88427 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cacna1hO88427 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Cacna1hO88427 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacna1hO88427 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.6■□□□□ 0.25
Cacna1hO88427 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.6■□□□□ 0.25
Cacna1hO88427 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1hO88427 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1hO88427 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.59■□□□□ 0.25
Cacna1hO88427 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cacna1hO88427 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms