Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.32■□□□□ 0.2
Vti1bO88384 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.32■□□□□ 0.2
Vti1bO88384 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vti1bO88384 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.32■□□□□ 0.2
Vti1bO88384 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vti1bO88384 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.32■□□□□ 0.2
Vti1bO88384 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vti1bO88384 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1bO88384 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vti1bO88384 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vti1bO88384 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.31■□□□□ 0.2
Vti1bO88384 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Gm10653-202ENSMUST00000139570 835 ntBASIC16.31■□□□□ 0.2
Vti1bO88384 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.31■□□□□ 0.2
Vti1bO88384 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.31■□□□□ 0.2
Vti1bO88384 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.31■□□□□ 0.2
Vti1bO88384 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vti1bO88384 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.31■□□□□ 0.2
Vti1bO88384 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vti1bO88384 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Vti1bO88384 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Vti1bO88384 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vti1bO88384 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vti1bO88384 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vti1bO88384 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vti1bO88384 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.29■□□□□ 0.2
Vti1bO88384 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
Vti1bO88384 Gm13158-201ENSMUST00000122007 736 ntBASIC16.29■□□□□ 0.2
Vti1bO88384 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1bO88384 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.29■□□□□ 0.2
Vti1bO88384 Gm20760-201ENSMUST00000179197 648 ntBASIC16.29■□□□□ 0.2
Vti1bO88384 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.29■□□□□ 0.2
Vti1bO88384 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.29■□□□□ 0.2
Vti1bO88384 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.29■□□□□ 0.2
Vti1bO88384 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.29■□□□□ 0.2
Vti1bO88384 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vti1bO88384 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.28■□□□□ 0.2
Vti1bO88384 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.28■□□□□ 0.2
Vti1bO88384 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vti1bO88384 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.28■□□□□ 0.2
Vti1bO88384 Gm10138-203ENSMUST00000206952 366 ntBASIC16.28■□□□□ 0.2
Vti1bO88384 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.28■□□□□ 0.2
Vti1bO88384 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1bO88384 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms