Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a1O88207 Gm8000-201ENSMUST00000188378 592 ntBASIC15.42■□□□□ 0.06
Col5a1O88207 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.42■□□□□ 0.06
Col5a1O88207 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Col5a1O88207 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a1O88207 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.42■□□□□ 0.06
Col5a1O88207 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a1O88207 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.42■□□□□ 0.06
Col5a1O88207 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col5a1O88207 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col5a1O88207 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.42■□□□□ 0.06
Col5a1O88207 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.41■□□□□ 0.06
Col5a1O88207 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Gm1401-201ENSMUST00000122048 772 ntBASIC15.41■□□□□ 0.06
Col5a1O88207 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.41■□□□□ 0.06
Col5a1O88207 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.41■□□□□ 0.06
Col5a1O88207 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.41■□□□□ 0.06
Col5a1O88207 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col5a1O88207 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.41■□□□□ 0.06
Col5a1O88207 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.41■□□□□ 0.06
Col5a1O88207 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col5a1O88207 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col5a1O88207 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.4■□□□□ 0.06
Col5a1O88207 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col5a1O88207 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Col5a1O88207 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Gm18421-201ENSMUST00000204122 625 ntBASIC15.4■□□□□ 0.06
Col5a1O88207 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col5a1O88207 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Col5a1O88207 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.39■□□□□ 0.05
Col5a1O88207 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Gm11779-201ENSMUST00000118541 368 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.39■□□□□ 0.05
Col5a1O88207 Mir5131-201ENSMUST00000175426 93 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.39■□□□□ 0.05
Col5a1O88207 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 Rps4l-201ENSMUST00000071745 943 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.39■□□□□ 0.05
Col5a1O88207 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col5a1O88207 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a1O88207 Gm4995-201ENSMUST00000117247 432 ntBASIC15.38■□□□□ 0.05
Col5a1O88207 Gm2213-201ENSMUST00000197485 688 ntBASIC15.38■□□□□ 0.05
Col5a1O88207 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.38■□□□□ 0.05
Col5a1O88207 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col5a1O88207 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a1O88207 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.38■□□□□ 0.05
Col5a1O88207 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col5a1O88207 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col5a1O88207 Gm43575-201ENSMUST00000196420 516 ntBASIC15.38■□□□□ 0.05
Col5a1O88207 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.38■□□□□ 0.05
Col5a1O88207 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.38■□□□□ 0.05
Col5a1O88207 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms